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FlaskTrack Laboratory Operations & Data Platform
Assistance layer · human-reviewed AI · organization-controlled context

AI with the laboratory context attached

Draft protocols from source material, find relevant knowledge, explore data, and review action plans in the system where laboratory work is recorded.

Because AI operates against connected FlaskTrack context, assistance can reference the same workflows, samples, files, reports, and organizational knowledge your team already governs instead of creating a second disconnected system.

FlaskTrack in practice

A draft scientists can inspect

Import a method to create a draft protocol with steps and materials, then review and correct it before the team uses it. Provider options remain configurable by the organisation.

AI should support human expertise, not replace it

FlaskTrack is built around the belief that the people performing and directing biological work remain the most important part of the process. AI is most valuable when it handles repetitive preparation and data-entry work while scientists, engineers, technicians, and operators retain responsibility for decisions.

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Human Judgment Remains Central Scientific interpretation, operational decisions, exception handling, and production approval remain with qualified people.
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Reduce Repetitive Data Entry Use AI to convert source material into structured records, draft reports, prepare protocols, and populate repeatable operational fields.
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Recover Time for Higher-Level Work Spend less time transcribing procedures and constructing boilerplate so teams can focus on research, analysis, troubleshooting, and execution.
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Review Before Production AI-generated protocols, workflows, materials, forms, and schemas remain reviewable until an authorized user updates and finalizes them. Explore Compliance overview →

Use the AI provider and models that fit your organization

FlaskTrack lets each organization configure its own AI provider, language model, embedding model, and connection settings. Your team controls how AI is deployed and which models are used for each supported capability.

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OpenAI Connect your organization’s OpenAI account and select the language and embedding models that match your performance and cost requirements.
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Anthropic Use Anthropic models for supported generation, document analysis, protocol creation, workflow imports, and organizational assistance.
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Ollama & Local Models Connect FlaskTrack to privately hosted Ollama models for greater infrastructure control and local AI processing. Run an offline agent with Ollama and Hermes →
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Enterprise On-Site AI Deployments FlaskTrack is built by an engineering and software team with experience deploying controlled infrastructure. Enterprise clients can engage us to evaluate, design, and configure private on-site FlaskTrack and LLM deployments. Explore Offline AI: Ollama, Hermes & FlaskTrack →
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Model Selection Choose the language model used for generation instead of relying on a hardcoded platform-wide model.
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Embedding Model Flexibility Configure the embedding model and dimensions used to index and search organizational knowledge.

Plan and execute laboratory work with AI agents

FlaskTrack combines an in-app agent with MCP access to your live laboratory system. Ask for an operational task in plain language, let the agent resolve the required records and dependencies, then review and approve the exact actions before anything changes.

Private AI infrastructure for controlled environments

Organizations with sensitive data, internal security requirements, or restricted network environments may need more than a hosted AI API. FlaskTrack supports enterprise planning and implementation for privately operated AI infrastructure.

Ask questions across documentation and organizational knowledge

The FlaskTrack assistant uses retrieval-augmented generation to find relevant information before answering. Users can work with platform documentation and organization-approved files from one controlled interface.

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FlaskTrack Documentation Ask how to configure, operate, or troubleshoot FlaskTrack using indexed platform documentation. Explore Platform documentation →
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Organization Knowledge Base Search files and notes that your organization has explicitly marked for inclusion in its knowledge base. Explore ELN & laboratory knowledge →
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Context-Grounded Answers Retrieve relevant document sections and use them as context for more useful answers tied to your organization’s actual records.
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Organization-Scoped Retrieval Keep indexed knowledge, document chunks, embeddings, and AI access scoped to the organization that owns them.

Build custom reports with AI-assisted SQL

Describe the report you need in plain language and let the report builder generate SQL designed for FlaskTrack’s analytical environment, available schemas, and custom organizational data.

Generate protocol drafts from a prompt or source file

FlaskTrack can transform a written request, research document, procedure, or uploaded file into a structured protocol that is ready for review.

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Prompt-to-Protocol Describe the biological procedure and generate a structured protocol draft with structured execution steps.
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File-to-Protocol Import a paper, procedure, protocol document, or operational note and convert it into FlaskTrack records.
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Materials & Requirements Generate required ingredients, tools, biological materials, quantities, concentrations, and supporting protocol requirements. Explore Scientific catalogs →
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Custom Data Forms Create the custom fields and data-capture schemas needed to record measurements, observations, outcomes, and execution details.

Import entire workflows from beginning to end

Supply a workflow source file and FlaskTrack can generate the connected protocols, ordered steps, required materials, and data-capture structures that make up the multi-step operational process.

AI-generated records remain under human control

Generated protocols, workflow structures, materials, and custom schemas are not immediately placed into production. FlaskTrack creates them as reviewable records so authorized users can inspect and correct the results first.

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Generated as Reviewable AI-created records enter the system in a reviewable state rather than becoming immediately available for production execution. Explore Compliance overview →
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Inspect Every Generated Record Review protocols, steps, materials, workflow ordering, custom fields, and generated schema definitions.
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Update Before Approval Correct generated content, add missing operational details, and align the import with your organization’s standards.
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Finalize for Production Approve reviewed records before they are used to run production workflows, batches, samples, and protocol executions.

AI capabilities built for controlled lab operations

  • ✔ Organization-managed OpenAI, Anthropic, and Ollama provider configurations
  • ✔ Configurable language models, embedding models, dimensions, and provider settings
  • ✔ Support for private and on-site enterprise model deployments
  • ✔ Retrieval-augmented chat across FlaskTrack documentation and approved organization files
  • ✔ Organization-scoped knowledge indexing, embeddings, and document retrieval
  • ✔ AI-generated, schema-aware SQL for custom Arrow Flight-backed reports
  • ✔ Complete protocol generation from prompts, papers, procedures, notes, and uploaded files
  • ✔ Automatic generation of protocol materials, requirements, custom forms, and schemas
  • ✔ End-to-end workflow generation containing multiple ordered protocols
  • ✔ Human-led review, correction, and approval of all AI-generated operational records
  • ✔ AI assistance focused on repetitive data entry, document conversion, and report preparation
  • ✔ Enterprise evaluation and setup of private, on-site FlaskTrack and LLM infrastructure
  • ✔ Technical deployment roadmaps for organizations implementing private AI internally
Buyer evaluation

Evaluate AI against your governance requirements

AI features should be assessed as part of your operating model—not as a substitute for scientific review.

Provider control

Confirm which providers, models, credentials, retention settings, and private deployment options your organization will permit.

Review responsibility

Define who may generate drafts, who must review them, and which actions still require formal approval or an electronic signature.

Measured value

Use representative documents and reporting tasks to verify that AI reduces administrative work without introducing unacceptable review burden.

Automate the monotonous work while people lead the science

FlaskTrack uses AI to accelerate structured preparation, data entry, knowledge retrieval, reporting, and document conversion. Human expertise remains responsible for interpretation, correction, approval, and production decisions. Your organization retains control of its provider, models, infrastructure, source material, generated records, and final operational use.

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